BASTOB has a Governing Board with seven members. The Board consists of 1 Chairperson, 1 Vice-chairperson, 1 Treasurer and four members. The General Body elects the Governing Board for a period of three years. The Board meets at least four times a year or more as is deemed necessary by the organization. The Board takes the required management decisions and advises the Executive Director in implementing programmes and activities of the organization, in managing its affairs and in safeguarding the interests of the stakeholders involved in the different programmes and levels.

The Executive Director is not a member of the Governing Board but works as an ex-officio member Secretary. The Executive Director is the Chief Executive Officer (CEO) of the organization. He is responsible for preparing the organizational plan, for overall management, implementation and monitoring the organizational activities and programmes. S/he has to raise funds and ensure its proper utilization. The Executive Director runs the day to day management of the organization with a skilled organizational set up at the central and branch levels.